PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004486724.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family Trihelix
Protein Properties Length: 470aa    MW: 54327.6 Da    PI: 4.5885
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004486724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix34.94e-11181265286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrer.gferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     Wt++e+l L+++  +     +r++l+   W++v+  ++e   +e++ +qC+++ + l+k+ykk k   ++  s +  +c+yf++++
  XP_004486724.1 181 WTDEETLILLDVWGNQFILNERKSLRFEEWKQVAGTVSELsNVEKTVTQCRNRVDTLKKKYKKDKIKFEETGSLDG-KCVYFKKMD 265
                     *************************************876167********************9988887767777.8*******8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.9E-18179267No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MDEDFENDPI EYDISYPHPK GYANLKRPLR NSPFSQSLAN QSAKDFNDDD DMEEDDGDED  60
DDNENTQKSN AMKIDDELQW IPIRKKLKRL MASFKFADPN HPVNDDEVEE WFERRNEGFD  120
DNDYKPKSHD METEKELEWQ SEKNKLKSWI STYEFAAQEP TQSTSAPKLS FGVRSSFIDH  180
WTDEETLILL DVWGNQFILN ERKSLRFEEW KQVAGTVSEL SNVEKTVTQC RNRVDTLKKK  240
YKKDKIKFEE TGSLDGKCVY FKKMDRLMST VSTPPQQANQ LDDMKNSPPN TEAISVEGLE  300
GSRGKKISEV KGCTDEPSSF KLLADFILKL GVIYEKMENE KWQQIVELEK LRMNFLNDME  360
TRRRQNFQRL INEILKLVQM DGKNEDSAKN LEGLQSEILK LVQMDGKNED SAKNLEGLQS  420
EILKLVQMDG KNEDSAKNLE GLQSEILKLV QMDHKNEGSA KHDGSAKSGI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004486724.10.0PREDICTED: kinesin-related protein 4-like
TrEMBLA0A072VC013e-82A0A072VC01_MEDTR; Myb/SANT-like DNA-binding domain protein
STRINGGLYMA13G43651.11e-67(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.14e-27Trihelix family protein